Codon Optimization using Map Reduce
نویسنده
چکیده
Codon Optimization helps increasing immuno-stimulatory nucleotide motifs or decreasing immunesuppresive motifs in DNA expression vectors. This enhances the efficiency of DNA vaccinations. In this paper, we investigate the existing Pattern Matching algorithm for Codon Optimization and try to rewrite the algorithm in MapReduce programming model for execution speed-up and faster computation. Keywords— codon optimization, pattern matching, MapReduce.
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